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@AlexGreenLab

Alex Green Lab

Code Repository for the Green Lab at Boston University

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  1. GARDN-SANDSTORM GARDN-SANDSTORM Public

    Code associated with the publication 'Generative and predictive neural networks for the design of functional RNA molecules'

    Jupyter Notebook 16 3

  2. vista vista Public

    Code for Robson et al. "Toehold-VISTA: A machine learning approach to decipher programmable RNA sensor-target interactions"

    Jupyter Notebook 3 1

  3. DesignofRNA-basedTranslationalRepressors DesignofRNA-basedTranslationalRepressors Public

    Contains downloadable code for the figures referenced in the "Design of RNA-based translational repressors" chapter from Methods in Molecular Biology

    2 1

  4. DesignOfRibocomputingDevices DesignOfRibocomputingDevices Public

    Contains downloadable code for the figures referenced in the "Design of Ribocomputing Devices for Complex Cellular Logic" chapter

    1

  5. RoboRibo RoboRibo Public

    Code for Robson et. al. "Automated assembly of programmable RNA-based sensors"

    ReScript 1

  6. TSGEN TSGEN Public

    MATLAB 1

Repositories

Showing 7 of 7 repositories
  • vista Public

    Code for Robson et al. "Toehold-VISTA: A machine learning approach to decipher programmable RNA sensor-target interactions"

    AlexGreenLab/vista's past year of commit activity
    Jupyter Notebook 3 1 0 0 Updated Aug 20, 2025
  • RoboRibo Public

    Code for Robson et. al. "Automated assembly of programmable RNA-based sensors"

    AlexGreenLab/RoboRibo's past year of commit activity
    ReScript 1 0 0 0 Updated Jul 31, 2025
  • GARDN-SANDSTORM Public

    Code associated with the publication 'Generative and predictive neural networks for the design of functional RNA molecules'

    AlexGreenLab/GARDN-SANDSTORM's past year of commit activity
    Jupyter Notebook 16 3 0 0 Updated Apr 8, 2025
  • FARSIGHT Public

    Code for designing FARSIGHT sensors for SNP-specific detection of nucleic acids

    AlexGreenLab/FARSIGHT's past year of commit activity
    MATLAB 0 0 0 0 Updated Mar 23, 2025
  • TSGEN Public
    AlexGreenLab/TSGEN's past year of commit activity
    MATLAB 0 1 0 0 Updated May 4, 2022
  • DesignofRNA-basedTranslationalRepressors Public

    Contains downloadable code for the figures referenced in the "Design of RNA-based translational repressors" chapter from Methods in Molecular Biology

    AlexGreenLab/DesignofRNA-basedTranslationalRepressors's past year of commit activity
    2 1 0 0 Updated Aug 27, 2021
  • DesignOfRibocomputingDevices Public

    Contains downloadable code for the figures referenced in the "Design of Ribocomputing Devices for Complex Cellular Logic" chapter

    AlexGreenLab/DesignOfRibocomputingDevices's past year of commit activity
    1 0 0 0 Updated Aug 27, 2021

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